Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AL035633.1-201ENST00000406139 838 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AZGP1P1-201ENST00000411909 902 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC009477.1-201ENST00000452936 217 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AL512638.1-201ENST00000457493 794 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AL512361.1-201ENST00000554200 418 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC138761.1-201ENST00000584393 385 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 AC008738.7-201ENST00000609744 511 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.93■□□□□ 0.14
PTCD2Q8WV60 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PTCD2Q8WV60 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 SERBP1P5-201ENST00000510079 1181 ntBASIC15.92■□□□□ 0.14
PTCD2Q8WV60 LINC02560-201ENST00000596379 459 ntBASIC15.92■□□□□ 0.14
PTCD2Q8WV60 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PTCD2Q8WV60 AC022144.1-201ENST00000602255 1580 ntBASIC15.92■□□□□ 0.14
PTCD2Q8WV60 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 KRT8P12-202ENST00000472924 1397 ntBASIC15.91■□□□□ 0.14
PTCD2Q8WV60 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.91■□□□□ 0.14
PTCD2Q8WV60 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms