Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 KRT18P2-201ENST00000447938 1258 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 RPL13AP23-201ENST00000480739 586 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AL078644.1-201ENST00000609881 752 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AC112693.3-201ENST00000624819 1983 ntBASIC13.62□□□□□ -0.23
CCDC107Q8WV48 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AC092474.2-201ENST00000424288 719 ntBASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AC034105.1-201ENST00000563488 319 ntBASIC13.61□□□□□ -0.23
CCDC107Q8WV48 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 AC091951.1-201ENST00000512854 2465 ntBASIC13.61□□□□□ -0.23
CCDC107Q8WV48 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CCDC107Q8WV48 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCDC107Q8WV48 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms