Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 AC008267.1-201ENST00000474858 1069 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 AC004066.1-201ENST00000502488 802 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 AL023803.2-201ENST00000620080 638 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 AC068587.8-201ENST00000641239 219 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 CYP2T1P-202ENST00000641596 2535 ntBASIC18.67■□□□□ 0.58
SNED1Q8TER0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SNED1Q8TER0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
SNED1Q8TER0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 PDIA3P2-201ENST00000428073 158 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 CEP164P1-201ENST00000455142 418 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 MESTP3-201ENST00000503460 968 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC005740.2-201ENST00000511085 419 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC116345.2-201ENST00000512837 523 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AL162426.1-201ENST00000624141 743 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC084018.2-201ENST00000613093 2607 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC084364.1-201ENST00000551967 1556 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC006480.2-201ENST00000609770 1337 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 SAMD11P1-201ENST00000571429 661 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.66■□□□□ 0.58
SNED1Q8TER0 AL118508.1-201ENST00000613502 2345 ntBASIC18.66■□□□□ 0.58
SNED1Q8TER0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 PCDHB19P-201ENST00000570871 2371 ntBASIC18.65■□□□□ 0.58
SNED1Q8TER0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SNED1Q8TER0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SNED1Q8TER0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms