Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 KRT8P35-201ENST00000483942 1338 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 AC016694.1-201ENST00000434179 700 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 RPL7P3-201ENST00000441388 714 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 CTBP2P5-201ENST00000454986 1264 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 AP000812.2-201ENST00000538934 718 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 AC244669.2-201ENST00000612320 853 ntBASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEDD1Q8NHV4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AL158070.2-201ENST00000623713 1621 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC148477.4-201ENST00000613430 1793 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 ACTBP8-201ENST00000403258 1108 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AL139094.1-201ENST00000405549 1188 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 KLF2P4-201ENST00000451959 1225 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC025279.2-201ENST00000569730 653 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC145423.3-201ENST00000615987 467 ntBASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.05■□□□□ 0.48
NEDD1Q8NHV4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AL138709.1-201ENST00000614840 1693 ntBASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 KRT223P-202ENST00000449164 1292 ntBASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 AC133552.6-201ENST00000613406 534 ntBASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEDD1Q8NHV4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms