Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 GPR53P-205ENST00000457298 1084 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC093813.1-201ENST00000605066 256 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC025181.2-201ENST00000606994 802 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC107373.2-201ENST00000607735 490 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 AC046158.3-201ENST00000624947 2558 ntBASIC16.76■□□□□ 0.27
BEST2Q8NFU1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
BEST2Q8NFU1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AC010319.3-201ENST00000597028 470 ntBASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AL359881.2-201ENST00000602973 570 ntBASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 AC084364.1-201ENST00000551967 1556 ntBASIC16.75■□□□□ 0.27
BEST2Q8NFU1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
BEST2Q8NFU1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 AC015936.2-201ENST00000593177 259 ntBASIC16.74■□□□□ 0.27
BEST2Q8NFU1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 RPSAP52-203ENST00000622976 1023 ntBASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 AC011270.2-201ENST00000624293 2550 ntBASIC16.74■□□□□ 0.27
BEST2Q8NFU1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST2Q8NFU1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms