Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ZNF439Q8NDP4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AZGP1P1-201ENST00000411909 902 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 CNN2P11-201ENST00000429351 262 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC004967.1-201ENST00000453589 447 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AL512356.2-201ENST00000546955 174 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC027612.4-201ENST00000605371 583 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 RN7SL828P-201ENST00000607615 303 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC134684.3-201ENST00000641758 218 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AL035456.1-201ENST00000456064 1369 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC090616.6-203ENST00000579186 1945 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC136621.1-201ENST00000624017 2304 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC144831.1-201ENST00000573312 2656 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 AC092127.1-201ENST00000567093 3455 ntBASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ZNF439Q8NDP4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 AC073347.1-201ENST00000421633 2643 ntBASIC13□□□□□ -0.33
ZNF439Q8NDP4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 AC013268.4-201ENST00000637413 2228 ntBASIC13□□□□□ -0.33
ZNF439Q8NDP4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF439Q8NDP4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF439Q8NDP4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms