Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 AL512361.1-201ENST00000554200 418 ntBASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 AL033527.5-202ENST00000641632 1098 ntBASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C11orf42Q8N5U0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 PHKG1P2-201ENST00000457537 863 ntBASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AL355385.1-201ENST00000606123 409 ntBASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 AL009178.2-201ENST00000597278 2719 ntBASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
C11orf42Q8N5U0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
C11orf42Q8N5U0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms