Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 AC138951.2-201ENST00000623455 1161 ntBASIC24.06■■□□□ 1.44
VPS8Q8N3P4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 AL359258.3-201ENST00000622910 2331 ntBASIC24.06■■□□□ 1.44
VPS8Q8N3P4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VPS8Q8N3P4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC133552.6-201ENST00000613406 534 ntBASIC24.05■■□□□ 1.44
VPS8Q8N3P4 MIR6752-201ENST00000618442 71 ntBASIC24.05■■□□□ 1.44
VPS8Q8N3P4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VPS8Q8N3P4 REXO1L5P-201ENST00000622260 2098 ntBASIC24.05■■□□□ 1.44
VPS8Q8N3P4 AC013268.4-201ENST00000637413 2228 ntBASIC24.05■■□□□ 1.44
VPS8Q8N3P4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AC026954.1-201ENST00000429771 1293 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 C2orf27AP3-201ENST00000434123 579 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 Six3os1_5.1-201ENST00000611000 271 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AL354718.3-201ENST00000616414 581 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 CR382287.1-201ENST00000623954 586 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AL033527.4-201ENST00000641026 673 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AL109954.1-202ENST00000564051 2148 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 AC022532.1-201ENST00000624563 1728 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VPS8Q8N3P4 LRRC59-203ENST00000576448 1531 ntBASIC24.04■■□□□ 1.44
VPS8Q8N3P4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 AC004466.1-201ENST00000599515 1080 ntBASIC24.03■■□□□ 1.44
VPS8Q8N3P4 AL008721.1-201ENST00000609964 604 ntBASIC24.03■■□□□ 1.44
VPS8Q8N3P4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 AC055811.4-201ENST00000624039 1754 ntBASIC24.03■■□□□ 1.44
VPS8Q8N3P4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC24.03■■□□□ 1.44
VPS8Q8N3P4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 AC006001.1-201ENST00000325130 474 ntBASIC24.02■■□□□ 1.44
VPS8Q8N3P4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC24.02■■□□□ 1.44
VPS8Q8N3P4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC24.02■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms