Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AL592424.1-201ENST00000563624 1536 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS52Q8N1B4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS52Q8N1B4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 KRT43P-201ENST00000434019 910 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17■□□□□ 0.31
VPS52Q8N1B4 AC245100.5-201ENST00000452108 331 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 USP32P1-208ENST00000506594 1164 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 HNRNPA1P13-201ENST00000510646 963 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 AC104989.1-201ENST00000519711 778 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17■□□□□ 0.31
VPS52Q8N1B4 KRT8P22-201ENST00000562317 1415 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17■□□□□ 0.31
VPS52Q8N1B4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17■□□□□ 0.31
VPS52Q8N1B4 AC133539.2-201ENST00000604757 467 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 RPSAP52-203ENST00000622976 1023 ntBASIC17■□□□□ 0.31
VPS52Q8N1B4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17■□□□□ 0.31
VPS52Q8N1B4 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VPS52Q8N1B4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS52Q8N1B4 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 AL442647.2-201ENST00000429864 857 ntBASIC16.99■□□□□ 0.31
VPS52Q8N1B4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.99■□□□□ 0.31
VPS52Q8N1B4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 AC018665.1-201ENST00000622927 1362 ntBASIC16.99■□□□□ 0.31
VPS52Q8N1B4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS52Q8N1B4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms