Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AL158211.3-201ENST00000607385 239 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AC005702.4-201ENST00000618393 416 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 C18orf15-201ENST00000623680 2534 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC112693.3-201ENST00000624819 1983 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC074338.1-201ENST00000416825 156 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC010740.1-201ENST00000417035 684 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC091917.2-201ENST00000505002 744 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC010336.2-201ENST00000564226 506 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AL590560.3-201ENST00000623350 461 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AF228730.6-201ENST00000641497 218 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC084121.3-201ENST00000641716 218 ntBASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.78□□□□□ -0.04
CCDC116Q8IYX3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 AC100757.3-201ENST00000622361 1406 ntBASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 AL109954.1-202ENST00000564051 2148 ntBASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 AC087499.5-201ENST00000452760 1342 ntBASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CCDC116Q8IYX3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.77□□□□□ -0.05
CCDC116Q8IYX3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms