Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 OR2I1P-209ENST00000641730 5365 ntBASIC16.3■□□□□ 0.2
RFX6Q8HWS3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.3■□□□□ 0.2
RFX6Q8HWS3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
RFX6Q8HWS3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AC109322.1-201ENST00000524499 1264 ntBASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AC069262.1-201ENST00000539058 672 ntBASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AL512356.2-201ENST00000546955 174 ntBASIC16.29■□□□□ 0.2
RFX6Q8HWS3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.29■□□□□ 0.2
RFX6Q8HWS3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 DNAJB3-202ENST00000449667 1266 ntBASIC16.28■□□□□ 0.2
RFX6Q8HWS3 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.28■□□□□ 0.2
RFX6Q8HWS3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 MIR6069-201ENST00000620069 79 ntBASIC16.28■□□□□ 0.2
RFX6Q8HWS3 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFX6Q8HWS3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms