Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
VPS13BQ7Z7G8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 MIR4649-201ENST00000582839 64 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AP001002.3-201ENST00000623482 206 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CLUHP2-201ENST00000426660 1303 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AL136309.1-201ENST00000403917 691 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AL603832.2-201ENST00000566195 2125 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AC007718.1-201ENST00000621078 280 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 AL805961.1-201ENST00000642026 753 ntBASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
VPS13BQ7Z7G8 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC116345.2-201ENST00000512837 523 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AL136301.1-201ENST00000615830 422 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 REXO1L2P-201ENST00000425429 2069 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AL008707.1-201ENST00000422498 534 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 DUX4L47-201ENST00000566374 394 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 MIR4754-201ENST00000582477 89 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 AC087045.2-201ENST00000606279 1003 ntBASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
VPS13BQ7Z7G8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms