Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 LINC02228-204ENST00000642115 2962 ntBASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
H3F3CQ6NXT2 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC068587.6-202ENST00000641839 5619 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC006449.5-201ENST00000610658 2098 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC112492.5-201ENST00000421897 457 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 ACA64.2-201ENST00000459014 129 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AC008735.3-201ENST00000596646 500 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AL049840.4-201ENST00000602422 811 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 INTS4P2-202ENST00000614726 2019 ntBASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H3F3CQ6NXT2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 TMEM14DP-201ENST00000422205 345 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 IGHV3-71-201ENST00000523324 359 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 HILS1-202ENST00000545329 423 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 AC120045.2-201ENST00000567334 178 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 AL008721.1-201ENST00000609964 604 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 CU634019.7-201ENST00000624153 1185 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 FP236241.2-201ENST00000624906 1185 ntBASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H3F3CQ6NXT2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 CYP2T1P-202ENST00000641596 2535 ntBASIC14.46□□□□□ -0.1
H3F3CQ6NXT2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms