Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RTL6Q6ICC9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AP001282.1-201ENST00000531301 1499 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 HAUS4P1-201ENST00000406739 1145 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AC022210.1-201ENST00000449856 793 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 PHKG1P2-201ENST00000457537 863 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AC036164.1-201ENST00000570544 333 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AC024909.3-201ENST00000611513 2257 ntBASIC14.13□□□□□ -0.15
RTL6Q6ICC9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RTL6Q6ICC9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AC104640.1-201ENST00000562617 2109 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 MIR658-201ENST00000385210 100 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 TOMM22P5-201ENST00000416399 439 ntBASIC14.12□□□□□ -0.15
RTL6Q6ICC9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.12□□□□□ -0.15
RTL6Q6ICC9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms