Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 Z97205.2-201ENST00000564697 1639 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 PRAL-201ENST00000624952 3286 ntBASIC16.44■□□□□ 0.22
RNF43Q68DV7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF43Q68DV7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF43Q68DV7 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 BNIP3P1-202ENST00000550043 1585 ntBASIC16.43■□□□□ 0.22
RNF43Q68DV7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 AL512384.1-201ENST00000406683 331 ntBASIC16.43■□□□□ 0.22
RNF43Q68DV7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 AC011495.1-201ENST00000498085 584 ntBASIC16.43■□□□□ 0.22
RNF43Q68DV7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 KRT8P37-201ENST00000451609 1420 ntBASIC16.43■□□□□ 0.22
RNF43Q68DV7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF43Q68DV7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF43Q68DV7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 MIR658-201ENST00000385210 100 ntBASIC16.42■□□□□ 0.22
RNF43Q68DV7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 AC104794.3-201ENST00000566840 1248 ntBASIC16.42■□□□□ 0.22
RNF43Q68DV7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF43Q68DV7 AC074044.1-201ENST00000609673 707 ntBASIC16.42■□□□□ 0.22
RNF43Q68DV7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF43Q68DV7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms