Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC009078.2-202ENST00000463353 338 ntBASIC15.16■□□□□ 0.02
RNF220Q5VTB9 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC145285.3-201ENST00000564603 959 ntBASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AC007064.4-201ENST00000637740 555 ntBASIC15.16■□□□□ 0.02
RNF220Q5VTB9 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AL592424.1-201ENST00000563624 1536 ntBASIC15.16■□□□□ 0.02
RNF220Q5VTB9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AC005622.1-201ENST00000636801 1703 ntBASIC15.15■□□□□ 0.02
RNF220Q5VTB9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.15■□□□□ 0.02
RNF220Q5VTB9 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 C18orf15-201ENST00000623680 2534 ntBASIC15.15■□□□□ 0.02
RNF220Q5VTB9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF220Q5VTB9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 U82695.1-201ENST00000635752 1889 ntBASIC15.14■□□□□ 0.01
RNF220Q5VTB9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF220Q5VTB9 MYO15B-237ENST00000642007 4893 ntBASIC15.14■□□□□ 0.01
RNF220Q5VTB9 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms