Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 ACTG1P3-201ENST00000431775 1114 ntBASIC19.12■□□□□ 0.65
ATP2B3Q16720 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATP2B3Q16720 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATP2B3Q16720 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 ATP5G2P4-201ENST00000442175 420 ntBASIC19.11■□□□□ 0.65
ATP2B3Q16720 ACA64.2-201ENST00000459014 129 ntBASIC19.11■□□□□ 0.65
ATP2B3Q16720 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 IGHV3-71-201ENST00000523324 359 ntBASIC19.11■□□□□ 0.65
ATP2B3Q16720 TDH-203ENST00000531764 1110 ntBASIC19.11■□□□□ 0.65
ATP2B3Q16720 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 PRAL-201ENST00000624952 3286 ntBASIC19.11■□□□□ 0.65
ATP2B3Q16720 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
ATP2B3Q16720 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
ATP2B3Q16720 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AC092127.1-201ENST00000567093 3455 ntBASIC19.1■□□□□ 0.65
ATP2B3Q16720 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AC127383.1-201ENST00000444697 1800 ntBASIC19.1■□□□□ 0.65
ATP2B3Q16720 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 RAB43P1-201ENST00000561790 589 ntBASIC19.1■□□□□ 0.65
ATP2B3Q16720 CLUHP6-201ENST00000580789 941 ntBASIC19.1■□□□□ 0.65
ATP2B3Q16720 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 AC005252.2-201ENST00000624630 1141 ntBASIC19.1■□□□□ 0.65
ATP2B3Q16720 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ATP2B3Q16720 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.1■□□□□ 0.65
ATP2B3Q16720 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ATP2B3Q16720 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP2B3Q16720 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms