| FOXC1 | Q12948 | AP003171.2-201 | ENST00000528208 | 925 nt | BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FAM227B-210 | ENST00000560246 | 911 nt | APPRIS ALT2 TSL 3 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | EXOSC5-204 | ENST00000596905 | 826 nt | TSL 2 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | MIR6842-201 | ENST00000612539 | 65 nt | BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | GPR39-203 | ENST00000622084 | 900 nt | TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC138466.4-201 | ENST00000623965 | 852 nt | BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FP236240.1-202 | ENST00000624019 | 601 nt | TSL 3 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC068587.8-201 | ENST00000641239 | 219 nt | BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AP005717.1-201 | ENST00000500705 | 1899 nt | TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | KCNC2-203 | ENST00000393288 | 2485 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | MIB2-219 | ENST00000505820 | 3305 nt | APPRIS P3 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | TRABD-201 | ENST00000303434 | 2329 nt | APPRIS P3 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SDCBP-204 | ENST00000447182 | 2103 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | RRN3-205 | ENST00000563559 | 2128 nt | TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | WBP2-201 | ENST00000254806 | 1944 nt | APPRIS P2 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SNAP47-AS1-201 | ENST00000413347 | 1708 nt | TSL 2 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SNRNP27-202 | ENST00000409116 | 1339 nt | TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | MAEA-207 | ENST00000505177 | 1340 nt | TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | TMEM106A-202 | ENST00000541594 | 1330 nt | TSL 2 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | UBE2Q2-208 | ENST00000569423 | 2969 nt | TSL 2 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | CASP16P-202 | ENST00000575497 | 2161 nt | TSL 2 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SLC38A5-213 | ENST00000620913 | 1993 nt | APPRIS P1 TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC020916.1-201 | ENST00000587762 | 1774 nt | BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SIN3B-202 | ENST00000379803 | 5129 nt | APPRIS P3 TSL 1 (best) BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PAX1-201 | ENST00000398485 | 2838 nt | APPRIS P3 TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC027796.3-201 | ENST00000572919 | 4753 nt | APPRIS P1 TSL 5 BASIC | 14.6 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | NDRG2-204 | ENST00000360463 | 2047 nt | APPRIS ALT1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FAM45A-201 | ENST00000361432 | 1648 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | UBQLN4-201 | ENST00000368309 | 3576 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AMT-224 | ENST00000635808 | 1610 nt | TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ACOT7-203 | ENST00000377845 | 1432 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ASXL1-212 | ENST00000620121 | 5374 nt | APPRIS ALT2 TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | CNGA3-205 | ENST00000436404 | 2504 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | THEG-201 | ENST00000342640 | 1877 nt | APPRIS P4 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SSFA2-201 | ENST00000320370 | 4965 nt | APPRIS P3 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | NFIX-210 | ENST00000588228 | 1692 nt | TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ZNF416-201 | ENST00000196489 | 2561 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PDE4A-202 | ENST00000344979 | 2579 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ATP6V0E2-212 | ENST00000611515 | 2565 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ANKRD17-211 | ENST00000639793 | 3486 nt | TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FEM1B-201 | ENST00000306917 | 7122 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | RCAN3-210 | ENST00000618490 | 2386 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | GPN3-201 | ENST00000228827 | 1468 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | TPM1-206 | ENST00000358278 | 1717 nt | APPRIS P3 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | C8G-201 | ENST00000224181 | 855 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | IL23A-201 | ENST00000228534 | 1046 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | RN7SKP214-201 | ENST00000364208 | 315 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | KLK8-204 | ENST00000391806 | 1051 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AL157935.1-209 | ENST00000415141 | 1105 nt | TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC012362.1-201 | ENST00000434906 | 739 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AL020996.1-201 | ENST00000442055 | 435 nt | TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | KLK11-204 | ENST00000453757 | 1174 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PFN2-206 | ENST00000461930 | 606 nt | TSL 4 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | GLYCTK-204 | ENST00000471180 | 992 nt | TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | IGHV3-37-201 | ENST00000518544 | 340 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AL132642.1-201 | ENST00000557646 | 553 nt | TSL 4 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC024361.2-201 | ENST00000574471 | 898 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | CRHR1-208 | ENST00000577353 | 1206 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | MIR4754-201 | ENST00000582477 | 89 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | GHRHR-212 | ENST00000611037 | 923 nt | TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AC242376.2-201 | ENST00000619355 | 883 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | YRDCP1-201 | ENST00000621419 | 643 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | CBR3-AS1-213 | ENST00000623647 | 815 nt | TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FLJ16779-201 | ENST00000612722 | 7638 nt | BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | Z98749.3-201 | ENST00000400206 | 1770 nt | APPRIS P1 TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | STC2-201 | ENST00000265087 | 5353 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PARVG-205 | ENST00000422871 | 3462 nt | APPRIS P1 TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | RNF114-201 | ENST00000244061 | 2503 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ELOVL7-205 | ENST00000508821 | 3994 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | CLDN9-201 | ENST00000445369 | 2050 nt | APPRIS P1 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | SNAI3-AS1-202 | ENST00000563475 | 2081 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PHC1-212 | ENST00000543824 | 4292 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | FKRP-202 | ENST00000391909 | 2801 nt | APPRIS P1 TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | EGR2-203 | ENST00000439032 | 2844 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PKN1-201 | ENST00000242783 | 3069 nt | APPRIS P1 TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ERGIC3-203 | ENST00000357394 | 1357 nt | APPRIS P4 TSL 2 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | COL9A1-204 | ENST00000370496 | 1372 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | EEFSEC-202 | ENST00000483457 | 1859 nt | TSL 5 BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | LINC02405-201 | ENST00000512624 | 1361 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AL355493.2-201 | ENST00000568270 | 1395 nt | TSL 1 (best) BASIC | 14.59 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | LMLN-204 | ENST00000420910 | 2423 nt | APPRIS P2 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | ARID1B-202 | ENST00000346085 | 10194 nt | APPRIS ALT2 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | AL035685.1-202 | ENST00000637341 | 1688 nt | TSL 5 BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | TAF6-211 | ENST00000453269 | 2464 nt | APPRIS P1 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | RAB33B-201 | ENST00000305626 | 4562 nt | APPRIS P1 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | TOR4A-201 | ENST00000357503 | 4148 nt | APPRIS P1 TSL 2 BASIC | 14.58 | □□□□□ -0.07 | | |
| FOXC1 | Q12948 | PLA1A-204 | ENST00000488919 | 1456 nt | TSL 2 BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | CMTM3-203 | ENST00000460097 | 1797 nt | TSL 2 BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | NACC2-201 | ENST00000277554 | 6899 nt | APPRIS P1 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | CCDC34-201 | ENST00000317945 | 2109 nt | APPRIS P3 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | GAD1-201 | ENST00000344257 | 1029 nt | TSL 5 BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | TOMM7-201 | ENST00000358435 | 778 nt | APPRIS P2 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | TMEM14B-202 | ENST00000379542 | 975 nt | APPRIS P1 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | SERPINE3-201 | ENST00000400389 | 1218 nt | APPRIS P1 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | AL136309.1-201 | ENST00000403917 | 691 nt | BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | CDRT15-201 | ENST00000420162 | 766 nt | APPRIS P2 TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | AC012360.1-201 | ENST00000433219 | 674 nt | TSL 5 BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | PRKRA-211 | ENST00000487082 | 1211 nt | TSL 1 (best) BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | AC079349.1-201 | ENST00000509096 | 589 nt | TSL 2 BASIC | 14.58 | □□□□□ -0.08 | | |
| FOXC1 | Q12948 | AC104561.3-201 | ENST00000518590 | 715 nt | TSL 5 BASIC | 14.58 | □□□□□ -0.08 | | |