Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 FO393414.2-201ENST00000405153 598 ntBASIC15.1■□□□□ 0.01
HMGCS1Q01581 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CNN2P11-201ENST00000429351 262 ntBASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 SNHG9-202ENST00000564014 471 ntBASIC15.1■□□□□ 0.01
HMGCS1Q01581 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL596442.2-201ENST00000610240 980 ntBASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGCS1Q01581 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGCS1Q01581 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 LINC00528-201ENST00000600723 2160 ntBASIC15.09■□□□□ 0.01
HMGCS1Q01581 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 TARDBPP1-201ENST00000442013 1203 ntBASIC15.09■□□□□ 0.01
HMGCS1Q01581 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AL035456.1-201ENST00000456064 1369 ntBASIC15.09■□□□□ 0.01
HMGCS1Q01581 KRT8P12-202ENST00000472924 1397 ntBASIC15.09■□□□□ 0.01
HMGCS1Q01581 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HMGCS1Q01581 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms