Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 AC074338.1-201ENST00000416825 156 ntBASIC14.88□□□□□ -0.03
SKP1P63208 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.88□□□□□ -0.03
SKP1P63208 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.88□□□□□ -0.03
SKP1P63208 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.88□□□□□ -0.03
SKP1P63208 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.88□□□□□ -0.03
SKP1P63208 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SKP1P63208 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SKP1P63208 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SKP1P63208 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.88□□□□□ -0.03
SKP1P63208 AP003680.1-201ENST00000598970 3660 ntBASIC14.88□□□□□ -0.03
SKP1P63208 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.88□□□□□ -0.03
SKP1P63208 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.88□□□□□ -0.03
SKP1P63208 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SKP1P63208 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
SKP1P63208 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.87□□□□□ -0.03
SKP1P63208 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SKP1P63208 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.87□□□□□ -0.03
SKP1P63208 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.87□□□□□ -0.03
SKP1P63208 AL132655.2-201ENST00000596276 594 ntBASIC14.87□□□□□ -0.03
SKP1P63208 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.87□□□□□ -0.03
SKP1P63208 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.87□□□□□ -0.03
SKP1P63208 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SKP1P63208 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.87□□□□□ -0.03
SKP1P63208 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.87□□□□□ -0.03
SKP1P63208 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.87□□□□□ -0.03
SKP1P63208 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SKP1P63208 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 SLC7A15P-201ENST00000424028 1363 ntBASIC14.86□□□□□ -0.03
SKP1P63208 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 PRAL-201ENST00000624952 3286 ntBASIC14.86□□□□□ -0.03
SKP1P63208 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms