Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC006453.4-201ENST00000636949 1252 ntBASIC12.73□□□□□ -0.37
LMO4P61968 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO4P61968 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO4P61968 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.73□□□□□ -0.37
LMO4P61968 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO4P61968 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO4P61968 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LMO4P61968 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO4P61968 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 AL513523.2-202ENST00000427283 2040 ntBASIC12.72□□□□□ -0.37
LMO4P61968 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 MIR1202-201ENST00000408529 83 ntBASIC12.72□□□□□ -0.37
LMO4P61968 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO4P61968 AL590640.2-201ENST00000457038 527 ntBASIC12.72□□□□□ -0.37
LMO4P61968 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO4P61968 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO4P61968 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO4P61968 RN7SL48P-201ENST00000579283 293 ntBASIC12.72□□□□□ -0.37
LMO4P61968 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.72□□□□□ -0.37
LMO4P61968 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 AL158070.2-201ENST00000623713 1621 ntBASIC12.72□□□□□ -0.37
LMO4P61968 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 BANP-204ENST00000393208 2283 ntTSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
LMO4P61968 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
LMO4P61968 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
LMO4P61968 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO4P61968 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO4P61968 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO4P61968 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
LMO4P61968 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.71□□□□□ -0.37
LMO4P61968 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
LMO4P61968 RPL5P21-201ENST00000404620 815 ntBASIC12.71□□□□□ -0.37
LMO4P61968 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO4P61968 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.71□□□□□ -0.37
LMO4P61968 PFN1P12-201ENST00000455938 534 ntBASIC12.71□□□□□ -0.37
LMO4P61968 AC108725.1-201ENST00000495472 409 ntBASIC12.71□□□□□ -0.37
LMO4P61968 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
LMO4P61968 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms