Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 DRD5P1-201ENST00000456605 1438 ntBASIC15.68■□□□□ 0.1
AP1S1P61966 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
AP1S1P61966 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
AP1S1P61966 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 AP006294.1-201ENST00000415407 339 ntBASIC15.68■□□□□ 0.1
AP1S1P61966 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.68■□□□□ 0.1
AP1S1P61966 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 RN7SL692P-201ENST00000464677 288 ntBASIC15.68■□□□□ 0.1
AP1S1P61966 GAPDHP40-201ENST00000505218 1006 ntBASIC15.68■□□□□ 0.1
AP1S1P61966 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.68■□□□□ 0.1
AP1S1P61966 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 CTBP2P3-201ENST00000585629 1255 ntBASIC15.68■□□□□ 0.1
AP1S1P61966 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.68■□□□□ 0.1
AP1S1P61966 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.68■□□□□ 0.1
AP1S1P61966 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
AP1S1P61966 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
AP1S1P61966 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.67■□□□□ 0.1
AP1S1P61966 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 AC124283.3-201ENST00000570869 594 ntBASIC15.67■□□□□ 0.1
AP1S1P61966 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.67■□□□□ 0.1
AP1S1P61966 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.67■□□□□ 0.1
AP1S1P61966 AC133539.2-201ENST00000604757 467 ntBASIC15.67■□□□□ 0.1
AP1S1P61966 AC093813.1-201ENST00000605066 256 ntBASIC15.67■□□□□ 0.1
AP1S1P61966 AC107373.2-201ENST00000607735 490 ntBASIC15.67■□□□□ 0.1
AP1S1P61966 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 SSR4P1-203ENST00000599569 2260 ntBASIC15.67■□□□□ 0.1
AP1S1P61966 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
AP1S1P61966 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.67■□□□□ 0.1
AP1S1P61966 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
AP1S1P61966 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
AP1S1P61966 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms