Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.09□□□□□ -0.15
VBP1P61758 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VBP1P61758 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 AC233702.3-201ENST00000578656 1387 ntBASIC14.09□□□□□ -0.15
VBP1P61758 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.09□□□□□ -0.15
VBP1P61758 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.08□□□□□ -0.15
VBP1P61758 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.08□□□□□ -0.15
VBP1P61758 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.08□□□□□ -0.15
VBP1P61758 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
VBP1P61758 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.08□□□□□ -0.15
VBP1P61758 AC011474.4-201ENST00000623523 2076 ntBASIC14.08□□□□□ -0.15
VBP1P61758 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
VBP1P61758 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.08□□□□□ -0.15
VBP1P61758 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 NTF6B-201ENST00000591913 560 ntBASIC14.08□□□□□ -0.16
VBP1P61758 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.08□□□□□ -0.16
VBP1P61758 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
VBP1P61758 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
VBP1P61758 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VBP1P61758 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.07□□□□□ -0.16
VBP1P61758 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VBP1P61758 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.07□□□□□ -0.16
VBP1P61758 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.07□□□□□ -0.16
VBP1P61758 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
VBP1P61758 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VBP1P61758 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms