Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AC106820.3-201ENST00000561653 397 ntBASIC20.6■□□□□ 0.89
ZC3H6P61129 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H6P61129 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H6P61129 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC20.6■□□□□ 0.89
ZC3H6P61129 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ZC3H6P61129 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZC3H6P61129 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H6P61129 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H6P61129 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H6P61129 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H6P61129 AL353726.2-201ENST00000623259 884 ntBASIC20.59■□□□□ 0.89
ZC3H6P61129 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
ZC3H6P61129 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H6P61129 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H6P61129 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H6P61129 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H6P61129 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H6P61129 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H6P61129 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H6P61129 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H6P61129 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H6P61129 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H6P61129 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H6P61129 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H6P61129 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H6P61129 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H6P61129 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H6P61129 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZC3H6P61129 RPL17P11-201ENST00000417593 544 ntBASIC20.58■□□□□ 0.89
ZC3H6P61129 AL008707.1-201ENST00000422498 534 ntBASIC20.58■□□□□ 0.89
ZC3H6P61129 CMC1-204ENST00000423894 549 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H6P61129 AC069218.1-201ENST00000435269 762 ntBASIC20.58■□□□□ 0.89
ZC3H6P61129 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H6P61129 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
ZC3H6P61129 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H6P61129 AC026740.1-201ENST00000607068 791 ntBASIC20.58■□□□□ 0.89
ZC3H6P61129 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.58■□□□□ 0.89
ZC3H6P61129 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H6P61129 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.58■□□□□ 0.88
ZC3H6P61129 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ZC3H6P61129 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 KRT8P29-201ENST00000420409 1371 ntBASIC20.58■□□□□ 0.88
ZC3H6P61129 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H6P61129 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZC3H6P61129 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.57■□□□□ 0.88
ZC3H6P61129 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 AL645937.2-201ENST00000396808 931 ntBASIC20.57■□□□□ 0.88
ZC3H6P61129 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H6P61129 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 AC104073.2-201ENST00000453737 312 ntBASIC20.57■□□□□ 0.88
ZC3H6P61129 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H6P61129 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.57■□□□□ 0.88
ZC3H6P61129 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H6P61129 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H6P61129 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms