Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDN12P56749 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDN12P56749 AL445228.2-201ENST00000605589 952 ntBASIC13.67□□□□□ -0.22
CLDN12P56749 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.67□□□□□ -0.22
CLDN12P56749 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN12P56749 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN12P56749 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLDN12P56749 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN12P56749 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.66□□□□□ -0.22
CLDN12P56749 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLDN12P56749 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.66□□□□□ -0.22
CLDN12P56749 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLDN12P56749 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.66□□□□□ -0.22
CLDN12P56749 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLDN12P56749 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLDN12P56749 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.65□□□□□ -0.22
CLDN12P56749 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLDN12P56749 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.65□□□□□ -0.22
CLDN12P56749 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms