Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 KRT223P-202ENST00000449164 1292 ntBASIC14.57□□□□□ -0.08
PER3P56645 AC007389.4-201ENST00000454674 793 ntBASIC14.57□□□□□ -0.08
PER3P56645 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.57□□□□□ -0.08
PER3P56645 TPRX2P-201ENST00000535362 881 ntBASIC14.57□□□□□ -0.08
PER3P56645 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.57□□□□□ -0.08
PER3P56645 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.57□□□□□ -0.08
PER3P56645 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
PER3P56645 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PER3P56645 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.56□□□□□ -0.08
PER3P56645 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.56□□□□□ -0.08
PER3P56645 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 AL031731.1-201ENST00000642131 2094 ntBASIC14.56□□□□□ -0.08
PER3P56645 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 AC073347.1-201ENST00000421633 2643 ntBASIC14.56□□□□□ -0.08
PER3P56645 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.56□□□□□ -0.08
PER3P56645 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
PER3P56645 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 RN7SL837P-201ENST00000463010 287 ntBASIC14.56□□□□□ -0.08
PER3P56645 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PER3P56645 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
PER3P56645 WASH4P-201ENST00000564273 1246 ntBASIC14.56□□□□□ -0.08
PER3P56645 CHCHD2P3-201ENST00000603038 451 ntBASIC14.56□□□□□ -0.08
PER3P56645 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
PER3P56645 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 FOXO1B-201ENST00000504678 1527 ntBASIC14.56□□□□□ -0.08
PER3P56645 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.56□□□□□ -0.08
PER3P56645 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PER3P56645 AC006538.1-201ENST00000567905 1585 ntBASIC14.56□□□□□ -0.08
PER3P56645 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.55□□□□□ -0.08
PER3P56645 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PER3P56645 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PER3P56645 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PER3P56645 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PER3P56645 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PER3P56645 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.55□□□□□ -0.08
PER3P56645 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PER3P56645 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PER3P56645 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PER3P56645 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms