Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.78■□□□□ 0.28
VCPP55072 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VCPP55072 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 AC093525.8-201ENST00000624099 1342 ntBASIC16.77■□□□□ 0.28
VCPP55072 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 AC022532.1-201ENST00000624563 1728 ntBASIC16.77■□□□□ 0.28
VCPP55072 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 AC108725.1-201ENST00000495472 409 ntBASIC16.77■□□□□ 0.28
VCPP55072 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.77■□□□□ 0.28
VCPP55072 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.77■□□□□ 0.28
VCPP55072 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.77■□□□□ 0.28
VCPP55072 RN7SL190P-201ENST00000582519 257 ntBASIC16.77■□□□□ 0.28
VCPP55072 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 AL365330.1-201ENST00000607459 531 ntBASIC16.77■□□□□ 0.28
VCPP55072 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VCPP55072 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VCPP55072 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
VCPP55072 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCPP55072 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
VCPP55072 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VCPP55072 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VCPP55072 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.77■□□□□ 0.27
VCPP55072 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 TUBB1P2-201ENST00000422712 1306 ntBASIC16.76■□□□□ 0.27
VCPP55072 TUBB1P1-201ENST00000503144 1300 ntBASIC16.76■□□□□ 0.27
VCPP55072 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.76■□□□□ 0.27
VCPP55072 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VCPP55072 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VCPP55072 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.76■□□□□ 0.27
VCPP55072 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.76■□□□□ 0.27
VCPP55072 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.76■□□□□ 0.27
VCPP55072 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.76■□□□□ 0.27
VCPP55072 AC024267.1-201ENST00000582320 895 ntBASIC16.76■□□□□ 0.27
VCPP55072 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.76■□□□□ 0.27
VCPP55072 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.76■□□□□ 0.27
VCPP55072 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.76■□□□□ 0.27
VCPP55072 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.76■□□□□ 0.27
VCPP55072 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VCPP55072 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
VCPP55072 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
VCPP55072 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.75■□□□□ 0.27
VCPP55072 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VCPP55072 AL589987.1-201ENST00000453380 819 ntBASIC16.75■□□□□ 0.27
VCPP55072 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms