Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.21■□□□□ 0.35
LBX1P52954 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 AC084262.1-201ENST00000567818 751 ntBASIC17.21■□□□□ 0.35
LBX1P52954 AC018846.1-201ENST00000568231 183 ntBASIC17.21■□□□□ 0.35
LBX1P52954 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
LBX1P52954 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LBX1P52954 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LBX1P52954 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LBX1P52954 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LBX1P52954 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.2■□□□□ 0.34
LBX1P52954 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 OR51A9P-201ENST00000422578 911 ntBASIC17.2■□□□□ 0.34
LBX1P52954 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.2■□□□□ 0.34
LBX1P52954 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 AC063952.3-201ENST00000467756 308 ntBASIC17.2■□□□□ 0.34
LBX1P52954 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 CHCHD2P2-201ENST00000503744 321 ntBASIC17.2■□□□□ 0.34
LBX1P52954 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
LBX1P52954 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.2■□□□□ 0.34
LBX1P52954 MIR4313-201ENST00000580760 101 ntBASIC17.2■□□□□ 0.34
LBX1P52954 AP005264.6-204ENST00000588436 719 ntBASIC17.2■□□□□ 0.34
LBX1P52954 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LBX1P52954 NAMA-206ENST00000605377 509 ntTSL 5 BASIC17.2■□□□□ 0.34
LBX1P52954 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
LBX1P52954 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 LINC01815-202ENST00000641468 1409 ntBASIC17.2■□□□□ 0.34
LBX1P52954 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LBX1P52954 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LBX1P52954 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.2■□□□□ 0.34
LBX1P52954 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
LBX1P52954 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 RN7SKP175-201ENST00000408472 289 ntBASIC17.19■□□□□ 0.34
LBX1P52954 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.19■□□□□ 0.34
LBX1P52954 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.19■□□□□ 0.34
LBX1P52954 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC17.19■□□□□ 0.34
LBX1P52954 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.19■□□□□ 0.34
LBX1P52954 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.19■□□□□ 0.34
LBX1P52954 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.19■□□□□ 0.34
LBX1P52954 AC110057.1-201ENST00000636031 898 ntBASIC17.19■□□□□ 0.34
LBX1P52954 AL603764.1-201ENST00000636452 321 ntBASIC17.19■□□□□ 0.34
LBX1P52954 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
LBX1P52954 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.19■□□□□ 0.34
LBX1P52954 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LBX1P52954 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.19■□□□□ 0.34
LBX1P52954 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC17.19■□□□□ 0.34
LBX1P52954 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LBX1P52954 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms