Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX2-5P52952 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX2-5P52952 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.31□□□□□ -0.28
NKX2-5P52952 AL138781.1-201ENST00000566567 1274 ntBASIC13.31□□□□□ -0.28
NKX2-5P52952 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.31□□□□□ -0.28
NKX2-5P52952 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.31□□□□□ -0.28
NKX2-5P52952 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.31□□□□□ -0.28
NKX2-5P52952 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NKX2-5P52952 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.3□□□□□ -0.28
NKX2-5P52952 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX2-5P52952 AC103564.2-201ENST00000432853 1299 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 AC122714.2-201ENST00000502787 707 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.3□□□□□ -0.28
NKX2-5P52952 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC13.3□□□□□ -0.28
NKX2-5P52952 AL353719.1-201ENST00000566847 864 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 DGCR10-201ENST00000609839 495 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 AL445209.1-201ENST00000607269 3491 ntBASIC13.3□□□□□ -0.28
NKX2-5P52952 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NKX2-5P52952 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.3□□□□□ -0.28
NKX2-5P52952 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NKX2-5P52952 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms