Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.59■□□□□ 0.41
USP11P51784 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.59■□□□□ 0.41
USP11P51784 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 AC107373.2-201ENST00000607735 490 ntBASIC17.59■□□□□ 0.41
USP11P51784 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.59■□□□□ 0.41
USP11P51784 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.59■□□□□ 0.41
USP11P51784 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.59■□□□□ 0.41
USP11P51784 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.59■□□□□ 0.41
USP11P51784 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 AC112693.3-201ENST00000624819 1983 ntBASIC17.59■□□□□ 0.41
USP11P51784 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.58■□□□□ 0.41
USP11P51784 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
USP11P51784 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
USP11P51784 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.58■□□□□ 0.4
USP11P51784 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.58■□□□□ 0.4
USP11P51784 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.58■□□□□ 0.4
USP11P51784 RN7SL752P-201ENST00000463779 287 ntBASIC17.58■□□□□ 0.4
USP11P51784 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
USP11P51784 AC011495.1-201ENST00000498085 584 ntBASIC17.58■□□□□ 0.4
USP11P51784 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.58■□□□□ 0.4
USP11P51784 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.58■□□□□ 0.4
USP11P51784 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.58■□□□□ 0.4
USP11P51784 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.58■□□□□ 0.4
USP11P51784 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.58■□□□□ 0.4
USP11P51784 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.58■□□□□ 0.4
USP11P51784 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.58■□□□□ 0.4
USP11P51784 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
USP11P51784 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 AC103702.1-201ENST00000548801 2630 ntBASIC17.58■□□□□ 0.4
USP11P51784 AL138799.1-201ENST00000448213 1675 ntBASIC17.58■□□□□ 0.4
USP11P51784 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
USP11P51784 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 AC104457.1-201ENST00000401024 814 ntBASIC17.57■□□□□ 0.4
USP11P51784 COX5BP8-201ENST00000416911 349 ntBASIC17.57■□□□□ 0.4
USP11P51784 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 AL162726.2-201ENST00000438986 1017 ntBASIC17.57■□□□□ 0.4
USP11P51784 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.57■□□□□ 0.4
USP11P51784 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
USP11P51784 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.57■□□□□ 0.4
USP11P51784 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
USP11P51784 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
USP11P51784 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms