Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.8□□□□□ -0.04
CLK1P49759 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 AC007686.3-201ENST00000619017 3487 ntBASIC14.8□□□□□ -0.04
CLK1P49759 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 MIR648-201ENST00000385046 94 ntBASIC14.8□□□□□ -0.04
CLK1P49759 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.8□□□□□ -0.04
CLK1P49759 UPF3AP3-201ENST00000420996 769 ntBASIC14.8□□□□□ -0.04
CLK1P49759 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.8□□□□□ -0.04
CLK1P49759 SPDYE11-202ENST00000450699 704 ntBASIC14.8□□□□□ -0.04
CLK1P49759 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.8□□□□□ -0.04
CLK1P49759 AC105233.2-201ENST00000523697 349 ntBASIC14.8□□□□□ -0.04
CLK1P49759 AF228730.5-201ENST00000530288 346 ntBASIC14.8□□□□□ -0.04
CLK1P49759 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.8□□□□□ -0.04
CLK1P49759 AL135744.1-201ENST00000565098 629 ntBASIC14.8□□□□□ -0.04
CLK1P49759 SPDYE9P-201ENST00000570642 692 ntBASIC14.8□□□□□ -0.04
CLK1P49759 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
CLK1P49759 SPDYE10P-202ENST00000612005 668 ntBASIC14.8□□□□□ -0.04
CLK1P49759 SPDYE8P-202ENST00000612377 668 ntBASIC14.8□□□□□ -0.04
CLK1P49759 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 AC073439.1-201ENST00000624121 1774 ntBASIC14.8□□□□□ -0.04
CLK1P49759 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 LINC01101-201ENST00000622953 1884 ntBASIC14.8□□□□□ -0.04
CLK1P49759 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.79□□□□□ -0.04
CLK1P49759 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.79□□□□□ -0.04
CLK1P49759 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.79□□□□□ -0.04
CLK1P49759 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 AL592424.1-201ENST00000563624 1536 ntBASIC14.79□□□□□ -0.04
CLK1P49759 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
CLK1P49759 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 AL365330.1-201ENST00000607459 531 ntBASIC14.79□□□□□ -0.04
CLK1P49759 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CLK1P49759 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CLK1P49759 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CLK1P49759 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.78□□□□□ -0.04
CLK1P49759 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLK1P49759 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
CLK1P49759 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms