Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPFP49454 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 SAMD11P1-201ENST00000571429 661 ntBASIC17.23■□□□□ 0.35
CENPFP49454 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPFP49454 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 AP002803.1-201ENST00000528836 498 ntBASIC17.23■□□□□ 0.35
CENPFP49454 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 RBM8B-201ENST00000555532 525 ntBASIC17.23■□□□□ 0.35
CENPFP49454 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
CENPFP49454 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CENPFP49454 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPFP49454 RCC2P8-201ENST00000502779 1035 ntBASIC17.23■□□□□ 0.35
CENPFP49454 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CENPFP49454 MIR5196-201ENST00000578146 115 ntBASIC17.23■□□□□ 0.35
CENPFP49454 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPFP49454 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.23■□□□□ 0.35
CENPFP49454 AP001527.2-201ENST00000614441 631 ntBASIC17.23■□□□□ 0.35
CENPFP49454 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.23■□□□□ 0.35
CENPFP49454 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CENPFP49454 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPFP49454 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.22■□□□□ 0.35
CENPFP49454 CICP11-201ENST00000434745 2827 ntBASIC17.22■□□□□ 0.35
CENPFP49454 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPFP49454 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.22■□□□□ 0.35
CENPFP49454 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.22■□□□□ 0.35
CENPFP49454 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.22■□□□□ 0.35
CENPFP49454 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.22■□□□□ 0.35
CENPFP49454 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.22■□□□□ 0.35
CENPFP49454 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.22■□□□□ 0.35
CENPFP49454 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.22■□□□□ 0.35
CENPFP49454 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CENPFP49454 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CENPFP49454 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 NPPA-201ENST00000376476 728 ntTSL 3 BASIC17.21■□□□□ 0.35
CENPFP49454 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.21■□□□□ 0.35
CENPFP49454 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
CENPFP49454 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CENPFP49454 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.21■□□□□ 0.35
CENPFP49454 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.21■□□□□ 0.35
CENPFP49454 AC090164.2-201ENST00000611487 516 ntBASIC17.21■□□□□ 0.35
CENPFP49454 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 ALG1L13P-202ENST00000519320 584 ntBASIC17.21■□□□□ 0.35
CENPFP49454 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.21■□□□□ 0.35
CENPFP49454 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CENPFP49454 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.21■□□□□ 0.35
CENPFP49454 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.21■□□□□ 0.35
CENPFP49454 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CENPFP49454 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms