Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SLC6A12P48065 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
SLC6A12P48065 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.05■□□□□ 0
SLC6A12P48065 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SLC6A12P48065 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 PMS2P2-201ENST00000425039 1128 ntBASIC15.05■□□□□ -0
SLC6A12P48065 FAM8A3P-201ENST00000427218 844 ntBASIC15.05■□□□□ -0
SLC6A12P48065 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 AL589987.1-201ENST00000453380 819 ntBASIC15.05■□□□□ -0
SLC6A12P48065 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 MEIS3P1-201ENST00000495167 958 ntBASIC15.05■□□□□ -0
SLC6A12P48065 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 AC005498.2-205ENST00000593218 784 ntBASIC15.05■□□□□ -0
SLC6A12P48065 SRD5A3P1-201ENST00000603021 949 ntBASIC15.05■□□□□ -0
SLC6A12P48065 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.05■□□□□ -0
SLC6A12P48065 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC6A12P48065 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC6A12P48065 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
SLC6A12P48065 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.05■□□□□ -0
SLC6A12P48065 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC6A12P48065 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.05■□□□□ -0
SLC6A12P48065 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A12P48065 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A12P48065 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC6A12P48065 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.04■□□□□ -0
SLC6A12P48065 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 WASH3P-207ENST00000560956 1394 ntBASIC15.04■□□□□ -0
SLC6A12P48065 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
SLC6A12P48065 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 AC135586.1-201ENST00000539323 574 ntBASIC15.04■□□□□ -0
SLC6A12P48065 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 AC004790.1-201ENST00000612686 536 ntBASIC15.04■□□□□ -0
SLC6A12P48065 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC6A12P48065 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC6A12P48065 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.04■□□□□ -0
SLC6A12P48065 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC6A12P48065 ZBED1P1-201ENST00000502364 1930 ntBASIC15.04■□□□□ -0
SLC6A12P48065 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC6A12P48065 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC6A12P48065 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.03■□□□□ -0
SLC6A12P48065 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms