Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.3■□□□□ 0.2
MMP13P45452 AL589739.1-201ENST00000607720 493 ntBASIC16.3■□□□□ 0.2
MMP13P45452 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.3■□□□□ 0.2
MMP13P45452 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.3■□□□□ 0.2
MMP13P45452 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MMP13P45452 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MMP13P45452 AC104581.4-201ENST00000623126 3052 ntBASIC16.3■□□□□ 0.2
MMP13P45452 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 AC092127.1-201ENST00000567093 3455 ntBASIC16.29■□□□□ 0.2
MMP13P45452 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MMP13P45452 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SPDYE17-201ENST00000412399 783 ntBASIC16.29■□□□□ 0.2
MMP13P45452 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
MMP13P45452 EEF1DP4-201ENST00000446006 880 ntBASIC16.29■□□□□ 0.2
MMP13P45452 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP13P45452 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 AL079307.3-201ENST00000556114 283 ntBASIC16.29■□□□□ 0.2
MMP13P45452 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.29■□□□□ 0.2
MMP13P45452 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.29■□□□□ 0.2
MMP13P45452 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MMP13P45452 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MMP13P45452 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.29■□□□□ 0.2
MMP13P45452 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 NFIC-211ENST00000641145 8399 ntBASIC16.28■□□□□ 0.2
MMP13P45452 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.28■□□□□ 0.2
MMP13P45452 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.28■□□□□ 0.2
MMP13P45452 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
MMP13P45452 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MMP13P45452 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MMP13P45452 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.28■□□□□ 0.2
MMP13P45452 AL645939.2-201ENST00000427340 991 ntBASIC16.28■□□□□ 0.2
MMP13P45452 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms