Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HMGCLP35914 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
HMGCLP35914 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.53■□□□□ 0.08
HMGCLP35914 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGCLP35914 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.53■□□□□ 0.08
HMGCLP35914 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.53■□□□□ 0.08
HMGCLP35914 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.53■□□□□ 0.08
HMGCLP35914 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.53■□□□□ 0.08
HMGCLP35914 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.53■□□□□ 0.08
HMGCLP35914 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.53■□□□□ 0.08
HMGCLP35914 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 AC104640.1-201ENST00000562617 2109 ntBASIC15.53■□□□□ 0.08
HMGCLP35914 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 LINC00554-201ENST00000564841 3011 ntBASIC15.53■□□□□ 0.08
HMGCLP35914 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 AC126365.1-201ENST00000578585 1514 ntBASIC15.53■□□□□ 0.08
HMGCLP35914 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGCLP35914 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGCLP35914 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 KRT8P44-201ENST00000441609 1350 ntBASIC15.52■□□□□ 0.08
HMGCLP35914 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HMGCLP35914 AL109954.1-202ENST00000564051 2148 ntBASIC15.52■□□□□ 0.08
HMGCLP35914 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
HMGCLP35914 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.52■□□□□ 0.08
HMGCLP35914 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCLP35914 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCLP35914 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCLP35914 API5-211ENST00000534695 560 ntTSL 5 BASIC15.52■□□□□ 0.08
HMGCLP35914 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.52■□□□□ 0.08
HMGCLP35914 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 AC093726.1-201ENST00000608064 963 ntBASIC15.52■□□□□ 0.08
HMGCLP35914 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.52■□□□□ 0.08
HMGCLP35914 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMGCLP35914 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.52■□□□□ 0.07
HMGCLP35914 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGCLP35914 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMGCLP35914 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.52■□□□□ 0.07
HMGCLP35914 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
HMGCLP35914 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGCLP35914 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.52■□□□□ 0.07
HMGCLP35914 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HMGCLP35914 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMGCLP35914 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
HMGCLP35914 HYMAI-201ENST00000635591 3347 ntBASIC15.51■□□□□ 0.07
HMGCLP35914 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms