Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PTPN6P29350 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 MROH4P-201ENST00000431302 1578 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 ZBED1P1-201ENST00000502364 1930 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 FGD5P1-202ENST00000614866 2498 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
PTPN6P29350 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.86□□□□□ -0.03
PTPN6P29350 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
PTPN6P29350 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 AC026979.3-201ENST00000607315 403 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 AC093512.1-201ENST00000617969 520 ntBASIC14.86□□□□□ -0.03
PTPN6P29350 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.86□□□□□ -0.03
PTPN6P29350 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
PTPN6P29350 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.86□□□□□ -0.03
PTPN6P29350 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
PTPN6P29350 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTPN6P29350 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PTPN6P29350 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 AJ011931.1-201ENST00000618749 2492 ntBASIC14.85□□□□□ -0.03
PTPN6P29350 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PTPN6P29350 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 HIST3H2BA-201ENST00000436555 524 ntBASIC14.85□□□□□ -0.03
PTPN6P29350 KLF2P3-201ENST00000451977 1087 ntBASIC14.85□□□□□ -0.03
PTPN6P29350 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.85□□□□□ -0.03
PTPN6P29350 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.85□□□□□ -0.03
PTPN6P29350 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 AL355385.1-201ENST00000606123 409 ntBASIC14.85□□□□□ -0.03
PTPN6P29350 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.85□□□□□ -0.03
PTPN6P29350 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 AL009178.2-201ENST00000597278 2719 ntBASIC14.85□□□□□ -0.03
PTPN6P29350 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.85□□□□□ -0.03
PTPN6P29350 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.85□□□□□ -0.03
PTPN6P29350 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
PTPN6P29350 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PTPN6P29350 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms