Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.17□□□□□ -0.14
GDF1P27539 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 GK-202ENST00000378941 458 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 AC007389.4-201ENST00000454674 793 ntBASIC14.17□□□□□ -0.14
GDF1P27539 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.17□□□□□ -0.14
GDF1P27539 AL359711.2-201ENST00000563105 872 ntBASIC14.17□□□□□ -0.14
GDF1P27539 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
GDF1P27539 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 PCDHA1-201ENST00000378133 2726 ntBASIC14.17□□□□□ -0.14
GDF1P27539 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 AC026691.1-201ENST00000602502 2017 ntBASIC14.17□□□□□ -0.14
GDF1P27539 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.17□□□□□ -0.14
GDF1P27539 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
GDF1P27539 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GDF1P27539 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.16□□□□□ -0.14
GDF1P27539 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GDF1P27539 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
GDF1P27539 C1QBPP1-201ENST00000400117 770 ntBASIC14.16□□□□□ -0.14
GDF1P27539 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.16□□□□□ -0.14
GDF1P27539 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.16□□□□□ -0.14
GDF1P27539 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
GDF1P27539 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.16□□□□□ -0.14
GDF1P27539 AC120045.2-201ENST00000567334 178 ntBASIC14.16□□□□□ -0.14
GDF1P27539 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.16□□□□□ -0.14
GDF1P27539 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GDF1P27539 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GDF1P27539 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GDF1P27539 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
GDF1P27539 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
GDF1P27539 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.15□□□□□ -0.14
GDF1P27539 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms