Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TNFRSF1BP20333 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 BX640515.1-201ENST00000617215 977 ntBASIC14.57□□□□□ -0.08
TNFRSF1BP20333 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 AC232323.1-201ENST00000540724 2099 ntBASIC14.57□□□□□ -0.08
TNFRSF1BP20333 REXO1L5P-201ENST00000622260 2098 ntBASIC14.57□□□□□ -0.08
TNFRSF1BP20333 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TNFRSF1BP20333 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC069335.1-201ENST00000489972 472 ntBASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms