Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 CYP4F24P-201ENST00000586049 1580 ntBASIC15.79■□□□□ 0.12
VCLP18206 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 AL359258.3-201ENST00000622910 2331 ntBASIC15.79■□□□□ 0.12
VCLP18206 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 AL691432.1-201ENST00000596308 1422 ntBASIC15.79■□□□□ 0.12
VCLP18206 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 RPL37AP1-201ENST00000412502 279 ntBASIC15.79■□□□□ 0.12
VCLP18206 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.79■□□□□ 0.12
VCLP18206 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.79■□□□□ 0.12
VCLP18206 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 RN7SL618P-201ENST00000477850 296 ntBASIC15.79■□□□□ 0.12
VCLP18206 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.79■□□□□ 0.12
VCLP18206 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.79■□□□□ 0.12
VCLP18206 AL390955.2-201ENST00000603032 514 ntBASIC15.79■□□□□ 0.12
VCLP18206 AL096865.1-201ENST00000606796 927 ntBASIC15.79■□□□□ 0.12
VCLP18206 AJ011932.1-201ENST00000621707 465 ntBASIC15.79■□□□□ 0.12
VCLP18206 AL590560.3-201ENST00000623350 461 ntBASIC15.79■□□□□ 0.12
VCLP18206 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 AC067930.6-201ENST00000623257 4947 ntBASIC15.79■□□□□ 0.12
VCLP18206 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
VCLP18206 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.79■□□□□ 0.12
VCLP18206 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
VCLP18206 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.78■□□□□ 0.12
VCLP18206 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VCLP18206 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.78■□□□□ 0.12
VCLP18206 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 AC087499.5-201ENST00000452760 1342 ntBASIC15.78■□□□□ 0.12
VCLP18206 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
VCLP18206 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 AL080243.2-201ENST00000418783 582 ntBASIC15.78■□□□□ 0.12
VCLP18206 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.78■□□□□ 0.12
VCLP18206 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.78■□□□□ 0.12
VCLP18206 SPCS2P1-201ENST00000561636 679 ntBASIC15.78■□□□□ 0.12
VCLP18206 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.78■□□□□ 0.12
VCLP18206 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.78■□□□□ 0.12
VCLP18206 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
VCLP18206 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.78■□□□□ 0.12
VCLP18206 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
VCLP18206 CICP24-201ENST00000605464 2705 ntBASIC15.78■□□□□ 0.12
VCLP18206 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
VCLP18206 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
VCLP18206 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VCLP18206 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
VCLP18206 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms