Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.34■□□□□ 0.21
PSMC3P17980 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.34■□□□□ 0.21
PSMC3P17980 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.34■□□□□ 0.21
PSMC3P17980 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 AC068587.3-201ENST00000526613 355 ntBASIC16.34■□□□□ 0.21
PSMC3P17980 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 AC124283.3-201ENST00000570869 594 ntBASIC16.34■□□□□ 0.21
PSMC3P17980 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.34■□□□□ 0.21
PSMC3P17980 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSMC3P17980 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSMC3P17980 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PSMC3P17980 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMC3P17980 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMC3P17980 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
PSMC3P17980 AL136379.1-201ENST00000623471 2642 ntBASIC16.33■□□□□ 0.21
PSMC3P17980 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.33■□□□□ 0.21
PSMC3P17980 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSMC3P17980 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.33■□□□□ 0.2
PSMC3P17980 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PSMC3P17980 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.33■□□□□ 0.2
PSMC3P17980 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 AC099336.1-201ENST00000417053 1171 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMC3P17980 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 AL355864.2-201ENST00000447420 863 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 FO681548.1-201ENST00000455617 1132 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 SLED1-202ENST00000512051 380 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 RNA5SP412-201ENST00000516234 123 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.33■□□□□ 0.2
PSMC3P17980 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMC3P17980 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMC3P17980 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMC3P17980 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.33■□□□□ 0.2
PSMC3P17980 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.33■□□□□ 0.2
PSMC3P17980 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 TUBB1P2-201ENST00000422712 1306 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 TUBB1P1-201ENST00000503144 1300 ntBASIC16.33■□□□□ 0.2
PSMC3P17980 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PSMC3P17980 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PSMC3P17980 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.33■□□□□ 0.2
PSMC3P17980 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMC3P17980 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMC3P17980 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.32■□□□□ 0.2
PSMC3P17980 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.32■□□□□ 0.2
PSMC3P17980 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PSMC3P17980 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.32■□□□□ 0.2
PSMC3P17980 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMC3P17980 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMC3P17980 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms