Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDGFRAP16234 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.43■□□□□ 0.22
PDGFRAP16234 C18orf15-201ENST00000623680 2534 ntBASIC16.43■□□□□ 0.22
PDGFRAP16234 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.43■□□□□ 0.22
PDGFRAP16234 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.42■□□□□ 0.22
PDGFRAP16234 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.42■□□□□ 0.22
PDGFRAP16234 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFRAP16234 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 SERBP1P5-201ENST00000510079 1181 ntBASIC16.42■□□□□ 0.22
PDGFRAP16234 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.42■□□□□ 0.22
PDGFRAP16234 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.42■□□□□ 0.22
PDGFRAP16234 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 AC004461.2-201ENST00000629517 803 ntBASIC16.42■□□□□ 0.22
PDGFRAP16234 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFRAP16234 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.42■□□□□ 0.22
PDGFRAP16234 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFRAP16234 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.42■□□□□ 0.22
PDGFRAP16234 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.42■□□□□ 0.22
PDGFRAP16234 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PDGFRAP16234 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDGFRAP16234 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 AC114501.2-201ENST00000439631 535 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 FAM207CP-201ENST00000443486 507 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.41■□□□□ 0.22
PDGFRAP16234 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFRAP16234 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDGFRAP16234 AC138761.1-201ENST00000584393 385 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.41■□□□□ 0.22
PDGFRAP16234 AC008761.3-201ENST00000624803 892 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.41■□□□□ 0.22
PDGFRAP16234 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 AC138035.3-201ENST00000622706 2791 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 BTBD7P1-201ENST00000447253 1453 ntBASIC16.41■□□□□ 0.22
PDGFRAP16234 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.41■□□□□ 0.22
PDGFRAP16234 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.41■□□□□ 0.22
PDGFRAP16234 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDGFRAP16234 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDGFRAP16234 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
PDGFRAP16234 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.4■□□□□ 0.22
PDGFRAP16234 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms