Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.43■□□□□ 0.38
RARBP10826 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.43■□□□□ 0.38
RARBP10826 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.43■□□□□ 0.38
RARBP10826 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.43■□□□□ 0.38
RARBP10826 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.43■□□□□ 0.38
RARBP10826 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RARBP10826 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.43■□□□□ 0.38
RARBP10826 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RARBP10826 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.42■□□□□ 0.38
RARBP10826 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.42■□□□□ 0.38
RARBP10826 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RARBP10826 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RARBP10826 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.42■□□□□ 0.38
RARBP10826 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.42■□□□□ 0.38
RARBP10826 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.42■□□□□ 0.38
RARBP10826 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.42■□□□□ 0.38
RARBP10826 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RARBP10826 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RARBP10826 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RARBP10826 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.42■□□□□ 0.38
RARBP10826 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RARBP10826 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.41■□□□□ 0.38
RARBP10826 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.41■□□□□ 0.38
RARBP10826 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 FNTAP2-201ENST00000430308 634 ntBASIC17.41■□□□□ 0.38
RARBP10826 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.41■□□□□ 0.38
RARBP10826 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.41■□□□□ 0.38
RARBP10826 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RARBP10826 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RARBP10826 AL354989.2-201ENST00000435838 1540 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms