Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 AC074338.1-201ENST00000416825 156 ntBASIC14.42□□□□□ -0.1
THBS1P07996 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS1P07996 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 BCRP1-201ENST00000444246 691 ntBASIC14.42□□□□□ -0.1
THBS1P07996 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS1P07996 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS1P07996 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS1P07996 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.42□□□□□ -0.1
THBS1P07996 AC025048.3-201ENST00000590609 569 ntBASIC14.42□□□□□ -0.1
THBS1P07996 AC005702.4-201ENST00000618393 416 ntBASIC14.42□□□□□ -0.1
THBS1P07996 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS1P07996 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.42□□□□□ -0.1
THBS1P07996 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 FO538757.1-201ENST00000623083 1397 ntBASIC14.42□□□□□ -0.1
THBS1P07996 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 MROH4P-201ENST00000431302 1578 ntBASIC14.42□□□□□ -0.1
THBS1P07996 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.42□□□□□ -0.1
THBS1P07996 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 AGAP7P-201ENST00000582299 2062 ntBASIC14.42□□□□□ -0.1
THBS1P07996 AGAP14-201ENST00000624701 2060 ntBASIC14.42□□□□□ -0.1
THBS1P07996 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
THBS1P07996 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS1P07996 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 AL133267.1-201ENST00000398220 340 ntBASIC14.41□□□□□ -0.1
THBS1P07996 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
THBS1P07996 RPL37AP1-201ENST00000412502 279 ntBASIC14.41□□□□□ -0.1
THBS1P07996 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 CNN2P2-201ENST00000443536 909 ntBASIC14.41□□□□□ -0.1
THBS1P07996 CNN2P3-201ENST00000450201 906 ntBASIC14.41□□□□□ -0.1
THBS1P07996 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS1P07996 AC025678.2-201ENST00000562061 970 ntBASIC14.41□□□□□ -0.1
THBS1P07996 AC015910.1-201ENST00000579400 975 ntBASIC14.41□□□□□ -0.1
THBS1P07996 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.41□□□□□ -0.1
THBS1P07996 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
THBS1P07996 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.41□□□□□ -0.1
THBS1P07996 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 AL136317.3-201ENST00000618497 906 ntBASIC14.41□□□□□ -0.1
THBS1P07996 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
THBS1P07996 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.41□□□□□ -0.1
THBS1P07996 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 AC099063.4-201ENST00000641099 1602 ntBASIC14.41□□□□□ -0.1
THBS1P07996 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THBS1P07996 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
THBS1P07996 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.4□□□□□ -0.1
THBS1P07996 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
THBS1P07996 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 AC091951.1-201ENST00000512854 2465 ntBASIC14.4□□□□□ -0.1
THBS1P07996 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THBS1P07996 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms