Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 RN7SL589P-201ENST00000481268 310 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 AC079140.1-201ENST00000508039 487 ntBASIC13.69□□□□□ -0.22
SFTPBP07988 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.69□□□□□ -0.22
SFTPBP07988 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.69□□□□□ -0.22
SFTPBP07988 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SFTPBP07988 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SFTPBP07988 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.68□□□□□ -0.22
SFTPBP07988 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.68□□□□□ -0.22
SFTPBP07988 TSEN15P1-201ENST00000423257 515 ntBASIC13.68□□□□□ -0.22
SFTPBP07988 AC005237.2-201ENST00000434368 219 ntBASIC13.68□□□□□ -0.22
SFTPBP07988 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 AC243562.1-201ENST00000560672 389 ntBASIC13.68□□□□□ -0.22
SFTPBP07988 AC073389.1-201ENST00000595595 795 ntBASIC13.68□□□□□ -0.22
SFTPBP07988 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
SFTPBP07988 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 FOXO1B-201ENST00000504678 1527 ntBASIC13.68□□□□□ -0.22
SFTPBP07988 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.68□□□□□ -0.22
SFTPBP07988 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
SFTPBP07988 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SFTPBP07988 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SFTPBP07988 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SFTPBP07988 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SFTPBP07988 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SFTPBP07988 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms