Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TPM3P06753 AC126335.2-201ENST00000623362 4637 ntBASIC17.6■□□□□ 0.41
TPM3P06753 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.6■□□□□ 0.41
TPM3P06753 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
TPM3P06753 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TPM3P06753 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 GPX1P2-201ENST00000429271 606 ntBASIC17.6■□□□□ 0.41
TPM3P06753 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 AC108751.1-201ENST00000490852 363 ntBASIC17.6■□□□□ 0.41
TPM3P06753 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.6■□□□□ 0.41
TPM3P06753 PRYP6-201ENST00000514804 343 ntBASIC17.6■□□□□ 0.41
TPM3P06753 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.6■□□□□ 0.41
TPM3P06753 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.6■□□□□ 0.41
TPM3P06753 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
TPM3P06753 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 AC127383.1-201ENST00000444697 1800 ntBASIC17.6■□□□□ 0.41
TPM3P06753 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 AC136759.1-202ENST00000530858 2194 ntBASIC17.6■□□□□ 0.41
TPM3P06753 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC17.6■□□□□ 0.41
TPM3P06753 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TPM3P06753 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TPM3P06753 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 REXO1L1P-202ENST00000608646 1974 ntBASIC17.59■□□□□ 0.41
TPM3P06753 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 HSPA7-201ENST00000445535 1927 ntBASIC17.59■□□□□ 0.41
TPM3P06753 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.59■□□□□ 0.41
TPM3P06753 FAM197Y8-203ENST00000450145 560 ntBASIC17.59■□□□□ 0.41
TPM3P06753 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.59■□□□□ 0.41
TPM3P06753 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 AC117500.6-201ENST00000624871 588 ntBASIC17.59■□□□□ 0.41
TPM3P06753 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.59■□□□□ 0.41
TPM3P06753 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
TPM3P06753 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TPM3P06753 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.59■□□□□ 0.41
TPM3P06753 BX640514.1-201ENST00000583223 1918 ntBASIC17.59■□□□□ 0.41
TPM3P06753 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TPM3P06753 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
TPM3P06753 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.58■□□□□ 0.41
TPM3P06753 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TPM3P06753 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms