Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 AC023157.3-201ENST00000619086 2088 ntBASIC15.83■□□□□ 0.13
HLA-DQB2P05538 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 MST1L-201ENST00000442552 2185 ntBASIC15.83■□□□□ 0.13
HLA-DQB2P05538 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DQB2P05538 AC148477.4-201ENST00000613430 1793 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 RPL5P21-201ENST00000404620 815 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 SERBP1P5-201ENST00000510079 1181 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC000095.1-201ENST00000603208 874 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC023024.2-201ENST00000623561 1993 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 CICP11-201ENST00000434745 2827 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC126365.1-201ENST00000578585 1514 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 AC091951.1-201ENST00000512854 2465 ntBASIC15.83■□□□□ 0.12
HLA-DQB2P05538 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DQB2P05538 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 TSPY16P-201ENST00000449843 468 ntBASIC15.82■□□□□ 0.12
HLA-DQB2P05538 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 TPRX2P-201ENST00000535362 881 ntBASIC15.82■□□□□ 0.12
HLA-DQB2P05538 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC011467.4-201ENST00000594891 528 ntBASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AL096865.1-201ENST00000606796 927 ntBASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC025181.2-201ENST00000606994 802 ntBASIC15.82■□□□□ 0.12
HLA-DQB2P05538 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.82■□□□□ 0.12
HLA-DQB2P05538 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms