Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 AC093909.3-201ENST00000504783 336 ntBASIC9.45□□□□□ -0.9
APOBP04114 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 NEU3-207ENST00000534628 746 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 SHC1P1-201ENST00000425230 1745 ntBASIC9.45□□□□□ -0.9
APOBP04114 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 AC022211.2-201ENST00000585075 2527 ntBASIC9.45□□□□□ -0.9
APOBP04114 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 FAM86KP-201ENST00000509817 987 ntBASIC9.45□□□□□ -0.9
APOBP04114 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 AC002472.3-201ENST00000640124 621 ntBASIC9.45□□□□□ -0.9
APOBP04114 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 MCC-208ENST00000514701 2855 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC9.45□□□□□ -0.9
APOBP04114 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 TSPY25P-201ENST00000429463 745 ntBASIC9.45□□□□□ -0.9
APOBP04114 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC9.45□□□□□ -0.9
APOBP04114 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 AC020910.5-201ENST00000623668 1865 ntBASIC9.45□□□□□ -0.9
APOBP04114 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC9.45□□□□□ -0.9
APOBP04114 USP4-203ENST00000415188 1454 ntTSL 3 BASIC9.45□□□□□ -0.9
APOBP04114 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
APOBP04114 AC124067.4-201ENST00000519691 2379 ntBASIC9.44□□□□□ -0.9
APOBP04114 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC9.44□□□□□ -0.9
APOBP04114 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 CR383656.3-201ENST00000551315 183 ntBASIC9.44□□□□□ -0.9
APOBP04114 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC9.44□□□□□ -0.9
APOBP04114 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC9.44□□□□□ -0.9
APOBP04114 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 AL008718.2-201ENST00000609206 1313 ntBASIC9.44□□□□□ -0.9
APOBP04114 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 ACTBP7-201ENST00000418351 1124 ntBASIC9.44□□□□□ -0.9
APOBP04114 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 AL512306.1-201ENST00000432698 848 ntBASIC9.44□□□□□ -0.9
APOBP04114 AC026320.2-201ENST00000434379 478 ntBASIC9.44□□□□□ -0.9
APOBP04114 BRI3P1-201ENST00000440440 378 ntBASIC9.44□□□□□ -0.9
APOBP04114 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC9.44□□□□□ -0.9
APOBP04114 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.44□□□□□ -0.9
APOBP04114 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC9.44□□□□□ -0.9
APOBP04114 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
APOBP04114 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC9.44□□□□□ -0.9
APOBP04114 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
APOBP04114 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
APOBP04114 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms