Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 MTX1P1-201ENST00000440904 838 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 CNN2P10-201ENST00000443067 918 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 AC004066.1-201ENST00000502488 802 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.84■□□□□ 0.29
CHRNA1P02708 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.84■□□□□ 0.29
CHRNA1P02708 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 AL354989.2-201ENST00000435838 1540 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 LRRC59-203ENST00000576448 1531 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 AC127383.1-201ENST00000444697 1800 ntBASIC16.84■□□□□ 0.29
CHRNA1P02708 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHRNA1P02708 LINC02199-201ENST00000506655 2702 ntBASIC16.83■□□□□ 0.29
CHRNA1P02708 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.83■□□□□ 0.29
CHRNA1P02708 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA1P02708 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CHRNA1P02708 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 AL645937.2-201ENST00000396808 931 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA1P02708 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AP006547.1-201ENST00000563435 692 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AC104982.3-201ENST00000581995 514 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.83■□□□□ 0.28
CHRNA1P02708 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AL096828.3-201ENST00000615354 462 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 ENPP7P14-201ENST00000621765 1040 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.83■□□□□ 0.28
CHRNA1P02708 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 AC068587.10-201ENST00000641210 219 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHRNA1P02708 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 AC010491.1-201ENST00000563101 2797 ntBASIC16.83■□□□□ 0.28
CHRNA1P02708 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHRNA1P02708 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CHRNA1P02708 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 EIF3FP3-201ENST00000434851 1086 ntBASIC16.82■□□□□ 0.28
CHRNA1P02708 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.82■□□□□ 0.28
CHRNA1P02708 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA1P02708 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.82■□□□□ 0.28
CHRNA1P02708 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms