Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.92□□□□□ -0.18
APOC1P02654 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.92□□□□□ -0.18
APOC1P02654 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
APOC1P02654 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 AC015656.1-201ENST00000624209 3578 ntBASIC13.91□□□□□ -0.18
APOC1P02654 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.91□□□□□ -0.18
APOC1P02654 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 EEF1DP4-201ENST00000446006 880 ntBASIC13.91□□□□□ -0.18
APOC1P02654 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 CEND1P1-201ENST00000451006 455 ntBASIC13.91□□□□□ -0.18
APOC1P02654 PHKG1P2-201ENST00000457537 863 ntBASIC13.91□□□□□ -0.18
APOC1P02654 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 POLD2P1-201ENST00000511220 997 ntBASIC13.91□□□□□ -0.18
APOC1P02654 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 RARRES2P9-201ENST00000565168 469 ntBASIC13.91□□□□□ -0.18
APOC1P02654 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.91□□□□□ -0.18
APOC1P02654 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
APOC1P02654 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 CYP4F24P-201ENST00000586049 1580 ntBASIC13.91□□□□□ -0.18
APOC1P02654 AP3S2-216ENST00000617003 1561 ntBASIC13.91□□□□□ -0.18
APOC1P02654 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC1P02654 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC1P02654 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.9□□□□□ -0.18
APOC1P02654 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOC1P02654 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC1P02654 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.9□□□□□ -0.18
APOC1P02654 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC1P02654 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOC1P02654 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms