Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GGPS1O95749 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 RPL7P3-201ENST00000441388 714 ntBASIC17.49■□□□□ 0.39
GGPS1O95749 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.49■□□□□ 0.39
GGPS1O95749 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.49■□□□□ 0.39
GGPS1O95749 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.49■□□□□ 0.39
GGPS1O95749 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
GGPS1O95749 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.49■□□□□ 0.39
GGPS1O95749 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GGPS1O95749 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GGPS1O95749 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
GGPS1O95749 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.48■□□□□ 0.39
GGPS1O95749 AC024909.3-201ENST00000611513 2257 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 ACKR1-201ENST00000368121 1240 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 AC099336.1-201ENST00000417053 1171 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.48■□□□□ 0.39
GGPS1O95749 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.48■□□□□ 0.39
GGPS1O95749 AC022137.2-201ENST00000503482 481 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.48■□□□□ 0.39
GGPS1O95749 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.48■□□□□ 0.39
GGPS1O95749 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.48■□□□□ 0.39
GGPS1O95749 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.48■□□□□ 0.39
GGPS1O95749 AL603832.2-201ENST00000566195 2125 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GGPS1O95749 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.48■□□□□ 0.39
GGPS1O95749 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.48■□□□□ 0.39
GGPS1O95749 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GGPS1O95749 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 REXO1L6P-201ENST00000603433 1515 ntBASIC17.47■□□□□ 0.39
GGPS1O95749 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GGPS1O95749 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GGPS1O95749 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.47■□□□□ 0.39
GGPS1O95749 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.47■□□□□ 0.39
GGPS1O95749 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.47■□□□□ 0.39
GGPS1O95749 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.47■□□□□ 0.39
GGPS1O95749 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.47■□□□□ 0.39
GGPS1O95749 AC244669.2-201ENST00000612320 853 ntBASIC17.47■□□□□ 0.39
GGPS1O95749 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GGPS1O95749 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.47■□□□□ 0.39
GGPS1O95749 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms